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  "Type": "Package",
  "Package": "BayesSIM",
  "Title": "Integrated Interface of Bayesian Single Index Models using\n'nimble'",
  "Version": "1.0.4",
  "Authors@R": "c(\nperson(\"Seowoo\", \"Jung\", , \"jsw1347@ewha.ac.kr\", role = c(\"aut\", \"cre\")),\nperson(\"Eun-kyung\", \"Lee\", , \"lee.eunk@ewha.ac.kr\", role = \"aut\")\n)",
  "Author": "Seowoo Jung [aut, cre], Eun-kyung Lee [aut]",
  "Maintainer": "Seowoo Jung <jsw1347@ewha.ac.kr>",
  "Description": "Provides tools for fitting Bayesian single index models\nwith flexible choices of priors for both the index and the link\nfunction. The package implements model estimation and posterior\ninference using efficient MCMC algorithms built on the 'nimble'\nframework, allowing users to specify, extend, and simulate\nmodels in a unified and reproducible manner. The following\nmethods are implemented in the package: Antoniadis et al.\n(2004) <https://www.jstor.org/stable/24307224>, Wang (2009)\n<doi:10.1016/j.csda.2008.12.010>, Choi et al. (2011)\n<doi:10.1080/10485251003768019>, Dhara et al. (2019)\n<doi:10.1214/19-BA1170>, McGee et al. (2023)\n<doi:10.1111/biom.13569>.",
  "License": "GPL (>= 2)",
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  "Encoding": "UTF-8",
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  "NeedsCompilation": "no",
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  "URL": "https://github.com/Seowoo-Jung/BayesSIM",
  "BugReports": "https://github.com/Seowoo-Jung/BayesSIM/issues",
  "Config/pak/sysreqs": "libglpk-dev make libicu-dev libxml2-dev",
  "Repository": "https://seowoo-jung.r-universe.dev",
  "Date/Publication": "2026-05-27 08:47:54 UTC",
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  "_published": "2026-05-28T08:21:55.596Z",
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    "author": "Seowoo Jung <jsw1347@naver.com>",
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    "message": "Add R CMD check workflow\n",
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    "extra/citation.cff",
    "extra/citation.html",
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    "extra/citation.txt",
    "extra/contents.json",
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    "extra/readme.md",
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  "_realowner": "seowoo-jung",
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      "date": "2025-10-30"
    },
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      "date": "2025-11-13"
    },
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    "BayesSIM",
    "BayesSIM_setup",
    "bsFisher",
    "bsFisher_setup",
    "bsPolar",
    "bsPolar_setup",
    "bsSphere",
    "bsSphere_setup",
    "bsSpike",
    "bsSpike_setup",
    "compileModelAndMCMC",
    "getInit",
    "getModel",
    "getModelDef",
    "getSampler",
    "getVarMonitor",
    "GOF",
    "gpFisher",
    "gpFisher_setup",
    "gpPolar",
    "gpPolar_setup",
    "gpPolarHigh",
    "gpPolarHigh_setup",
    "gpSphere",
    "gpSphere_setup",
    "gpSpike",
    "gpSpike_setup",
    "init_param",
    "nimTraceplot",
    "prior_param"
  ],
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    {
      "name": "concrete",
      "title": "UCI Concrete Compressive Strength (n = 1030, p = 8)",
      "object": "concrete",
      "class": [
        "data.frame"
      ],
      "fields": [
        "cement",
        "blast_furnace_slag",
        "flay_ash",
        "water",
        "superplasticizer",
        "coarse_aggreate",
        "fine_aggregate",
        "age",
        "strength"
      ],
      "rows": 1030,
      "table": true,
      "tojson": true
    },
    {
      "name": "DATA1",
      "title": "Simulated Single–Index Data (n = 200, p = 4)",
      "object": "DATA1",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "as_bsim.bsimSetup",
      "title": "Construct a Fitted Model Object from Model Setup and MCMC Output",
      "topics": [
        "as_bsim",
        "as_bsim.bsimSetup"
      ]
    },
    {
      "page": "as.data.frame.bsimPred",
      "title": "Extract the Result Data.frame",
      "topics": [
        "as.data.frame.bsimPred"
      ]
    },
    {
      "page": "BayesSIM",
      "title": "Integrated Function for Bayesian Single-Index Regression",
      "topics": [
        "BayesSIM",
        "BayesSIM_setup",
        "print.bsim",
        "print.bsimSetup"
      ]
    },
    {
      "page": "bsFisher",
      "title": "Bayesian Single-Index Regression with B-Spline Link and von Mises-Fisher Prior",
      "topics": [
        "bsFisher",
        "bsFisher_setup"
      ]
    },
    {
      "page": "bsPolar",
      "title": "Bayesian Single-Index Regression with B-Spline Link and One-to-One Polar Transformation",
      "topics": [
        "bsPolar",
        "bsPolar_setup"
      ]
    },
    {
      "page": "bsSphere",
      "title": "Bayesian Single-Index Regression with B-Spline Link and Half-Unit Sphere Prior",
      "topics": [
        "bsSphere",
        "bsSphere_setup"
      ]
    },
    {
      "page": "bsSpike",
      "title": "Bayesian Single-Index Regression with B-Spline Link and Spike-and-Slab Prior",
      "topics": [
        "bsSpike",
        "bsSpike_setup"
      ]
    },
    {
      "page": "coef.bsim",
      "title": "Extract Index Vector Coefficients from 'BayesSIM'",
      "topics": [
        "coef.bsim"
      ]
    },
    {
      "page": "compileModelAndMCMC",
      "title": "Compile a 'nimble' Model and Its MCMC",
      "topics": [
        "compileModelAndMCMC"
      ]
    },
    {
      "page": "concrete",
      "title": "UCI Concrete Compressive Strength (n = 1030, p = 8)",
      "topics": [
        "concrete"
      ]
    },
    {
      "page": "DATA1",
      "title": "Simulated Single–Index Data (n = 200, p = 4)",
      "topics": [
        "DATA1"
      ]
    },
    {
      "page": "fitted.bsim",
      "title": "Extract Fitted Values from 'BayesSIM'",
      "topics": [
        "fitted.bsim"
      ]
    },
    {
      "page": "getFunction",
      "title": "Get nimbleModel and nimbleSampler Object from the Result of 'compileModelAndMCMC'",
      "topics": [
        "getFunction",
        "getModel",
        "getSampler"
      ]
    },
    {
      "page": "getInit",
      "title": "Get Initial Value of the Model",
      "topics": [
        "getInit"
      ]
    },
    {
      "page": "getModelDef",
      "title": "Get Definition of the Model",
      "topics": [
        "getModelDef"
      ]
    },
    {
      "page": "getVarMonitor",
      "title": "Retrieve Monitorable Variables",
      "topics": [
        "getVarMonitor"
      ]
    },
    {
      "page": "GOF.bsim",
      "title": "Goodness of Fit for 'BayesSIM'",
      "topics": [
        "GOF",
        "GOF.bsim"
      ]
    },
    {
      "page": "gpFisher",
      "title": "Bayesian Single-Index Regression with Gaussian Process Link and von Mises-Fisher Prior",
      "topics": [
        "gpFisher",
        "gpFisher_setup"
      ]
    },
    {
      "page": "gpPolar",
      "title": "Bayesian Single-Index Regression with Gaussian Process Link and One-to-One Polar Transformation",
      "topics": [
        "gpPolar",
        "gpPolarHigh",
        "gpPolarHigh_setup",
        "gpPolar_setup"
      ]
    },
    {
      "page": "gpSphere",
      "title": "Bayesian Single-Index Regression with Gaussian Process Link and Unit Sphere Prior",
      "topics": [
        "gpSphere",
        "gpSphere_setup"
      ]
    },
    {
      "page": "gpSpike",
      "title": "Bayesian Single-Index Regression with Gaussian Process Link and Spike-and-Slab Prior",
      "topics": [
        "gpSpike",
        "gpSpike_setup"
      ]
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      "page": "init_param",
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        "init_param"
      ]
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      "topics": [
        "nimTraceplot"
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      "page": "plot.bsim",
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      "topics": [
        "plot.bsim",
        "plot.bsimPred"
      ]
    },
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      "topics": [
        "plot.bsimSetup"
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        "print.bsimPred"
      ]
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      "topics": [
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        "summary.bsim"
      ]
    },
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        "summary.bsimPred"
      ]
    },
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